BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C09SP1|AL430370
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1099 1739 0.0
>3x_Contig1099
Length = 3902
Score = 1739 bits (877), Expect = 0.0
Identities = 877/877 (100%)
Strand = Plus / Minus
Query: 1 ccccaagaaatgaaaaggatcgcgttgagattcaatccggtactgaattcggtaagacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 ccccaagaaatgaaaaggatcgcgttgagattcaatccggtactgaattcggtaagacac 930
Query: 61 ttggtactccaatcggtatgcttgtgaaaaacgaggatcaaagacctcacgattacagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 ttggtactccaatcggtatgcttgtgaaaaacgaggatcaaagacctcacgattacagtg 870
Query: 121 atatggacaattacccaagaccttcgcatgctgatttcacttacagcagcaagtatggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 atatggacaattacccaagaccttcgcatgctgatttcacttacagcagcaagtatggca 810
Query: 181 tcaaagcttcttctggtggtggaagatcatcagcaagagagacaattggtcgtgttgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tcaaagcttcttctggtggtggaagatcatcagcaagagagacaattggtcgtgttgctg 750
Query: 241 ctggtgccattgctgaaaagttcctaaaacagttatccaacgttgaaattgttgcctttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ctggtgccattgctgaaaagttcctaaaacagttatccaacgttgaaattgttgcctttg 690
Query: 301 tcacccaaatcggtgctgtcaagatgaacagagatccacaggatccaaaattccaacagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tcacccaaatcggtgctgtcaagatgaacagagatccacaggatccaaaattccaacagg 630
Query: 361 ttctgaataccatcacaagagaaaaagttgatgccgctggcccaattagatgcccggatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttctgaataccatcacaagagaaaaagttgatgccgctggcccaattagatgcccggatt 570
Query: 421 catctgtcgctgatgctatggtgaaggaaattgaaagatacagaggtgaaaaggattcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 catctgtcgctgatgctatggtgaaggaaattgaaagatacagaggtgaaaaggattcca 510
Query: 481 ttggtggtgttgtcacgtgtgtcatcagaaatctacctgcgggccttggtgaaccttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttggtggtgttgtcacgtgtgtcatcagaaatctacctgcgggccttggtgaaccttgtt 450
Query: 541 tcgataaattagaagccttgctagcacatgctatgctctcaatcccagcttccaagggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcgataaattagaagccttgctagcacatgctatgctctcaatcccagcttccaagggtt 390
Query: 601 tcgagattggttccggattcgatggcgtttgtttgccaggttctaagcataacgatccct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcgagattggttccggattcgatggcgtttgtttgccaggttctaagcataacgatccct 330
Query: 661 tctacttcgatgaggacaccggaagactaagaacaaagacgaacaactctggtggtattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tctacttcgatgaggacaccggaagactaagaacaaagacgaacaactctggtggtattc 270
Query: 721 aaggtggtatctcaaatggagaaaacatctacttctctgtacctttcaaatctgcagcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaggtggtatctcaaatggagaaaacatctacttctctgtacctttcaaatctgcagcta 210
Query: 781 ctatttctcaagaacaagctactgctacctacgacggtaaatctggtattctagctgcta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ctatttctcaagaacaagctactgctacctacgacggtaaatctggtattctagctgcta 150
Query: 841 aaggtagacacgacccttctgtcaccccaagagccac 877
|||||||||||||||||||||||||||||||||||||
Sbjct: 149 aaggtagacacgacccttctgtcaccccaagagccac 113
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6426
Number of Sequences: 1807
Number of extensions: 6426
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)